Class CheckTriplets

java.lang.Object
  CheckTriplets

public class CheckTriplets
extends java.lang.Object

This program checks a pedigree specified by a list of triplets for self consisency and completeness. Error messages are output to the screen. The checked pedigree is output in LINKAGE format.

Usage : java CheckTriplets < triplet.file > output.ped

where

• triplet.file is a file specifiying the pedigree as a list of triplet. One triplet per line. Order is assumed to be individual id, father's id, mother's id. Any other data following this is ignored.
• output.ped is the checked pedigree output file.

Constructor Summary

CheckTriplets()

Method Summary

static void

main(java.lang.String[] args)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CheckTriplets

public CheckTriplets()

Method Detail

main

public static void main(java.lang.String[] args)